Joint MR sequence optimization beats pure neural network approaches for
spin-echo MRI super-resolution
- URL: http://arxiv.org/abs/2305.07524v1
- Date: Fri, 12 May 2023 14:40:25 GMT
- Title: Joint MR sequence optimization beats pure neural network approaches for
spin-echo MRI super-resolution
- Authors: Hoai Nam Dang, Vladimir Golkov, Thomas Wimmer, Daniel Cremers, Andreas
Maier and Moritz Zaiss
- Abstract summary: Current MRI super-resolution (SR) methods only use existing contrasts acquired from typical clinical sequences as input for the neural network (NN)
We propose a known-operator learning approach to perform an end-to-end optimization of MR sequence and neural net-work parameters for SR-TSE.
- Score: 44.52688267348063
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Current MRI super-resolution (SR) methods only use existing contrasts
acquired from typical clinical sequences as input for the neural network (NN).
In turbo spin echo sequences (TSE) the sequence parameters can have a strong
influence on the actual resolution of the acquired image and have consequently
a considera-ble impact on the performance of the NN. We propose a
known-operator learning approach to perform an end-to-end optimization of MR
sequence and neural net-work parameters for SR-TSE. This MR-physics-informed
training procedure jointly optimizes the radiofrequency pulse train of a proton
density- (PD-) and T2-weighted TSE and a subsequently applied convolutional
neural network to predict the corresponding PDw and T2w super-resolution TSE
images. The found radiofrequency pulse train designs generate an optimal signal
for the NN to perform the SR task. Our method generalizes from the
simulation-based optimi-zation to in vivo measurements and the acquired
physics-informed SR images show higher correlation with a time-consuming
segmented high-resolution TSE sequence compared to a pure network training
approach.
Related papers
- Stochastic Gradient Descent for Two-layer Neural Networks [2.0349026069285423]
This paper presents a study on the convergence rates of the descent (SGD) algorithm when applied to overparameterized two-layer neural networks.
Our approach combines the Tangent Kernel (NTK) approximation with convergence analysis in the Reproducing Kernel Space (RKHS) generated by NTK.
Our research framework enables us to explore the intricate interplay between kernel methods and optimization processes, shedding light on the dynamics and convergence properties of neural networks.
arXiv Detail & Related papers (2024-07-10T13:58:57Z) - INFusion: Diffusion Regularized Implicit Neural Representations for 2D and 3D accelerated MRI reconstruction [0.0]
Implicit Neural Representations (INRs) are a learning-based approach to accelerate Magnetic Resonance Imaging (MRI) acquisitions.
This work proposes INFusion, a technique that regularizes the optimization of INRs from under-sampled MR measurements.
We also propose a hybrid 3D approach with our diffusion regularization that enables INR application on large-scale 3D MR datasets.
arXiv Detail & Related papers (2024-06-19T23:51:26Z) - Spatial and Modal Optimal Transport for Fast Cross-Modal MRI Reconstruction [54.19448988321891]
We propose an end-to-end deep learning framework that utilizes T1-weighted images (T1WIs) as auxiliary modalities to expedite T2WIs' acquisitions.
We employ Optimal Transport (OT) to synthesize T2WIs by aligning T1WIs and performing cross-modal synthesis.
We prove that the reconstructed T2WIs and the synthetic T2WIs become closer on the T2 image manifold with iterations increasing.
arXiv Detail & Related papers (2023-05-04T12:20:51Z) - Attention-based convolutional neural network for perfusion T2-weighted
MR images preprocessing [0.0]
We propose different integration strategies for the spatial and channel squeeze and excitation attention mechanism into the baseline U-Net+ResNet neural network architecture.
We investigate the performance of skull-stripping in T2-star weighted MR images with abnormal brain anatomy.
arXiv Detail & Related papers (2023-03-04T22:40:59Z) - Modality-Agnostic Variational Compression of Implicit Neural
Representations [96.35492043867104]
We introduce a modality-agnostic neural compression algorithm based on a functional view of data and parameterised as an Implicit Neural Representation (INR)
Bridging the gap between latent coding and sparsity, we obtain compact latent representations non-linearly mapped to a soft gating mechanism.
After obtaining a dataset of such latent representations, we directly optimise the rate/distortion trade-off in a modality-agnostic space using neural compression.
arXiv Detail & Related papers (2023-01-23T15:22:42Z) - A Long Short-term Memory Based Recurrent Neural Network for
Interventional MRI Reconstruction [50.1787181309337]
We propose a convolutional long short-term memory (Conv-LSTM) based recurrent neural network (RNN), or ConvLR, to reconstruct interventional images with golden-angle radial sampling.
The proposed algorithm has the potential to achieve real-time i-MRI for DBS and can be used for general purpose MR-guided intervention.
arXiv Detail & Related papers (2022-03-28T14:03:45Z) - Deep Convolutional Learning-Aided Detector for Generalized Frequency
Division Multiplexing with Index Modulation [0.0]
The proposed method first pre-processes the received signal by using a zero-forcing (ZF) detector and then uses a neural network consisting of a convolutional neural network (CNN) followed by a fully-connected neural network (FCNN)
The FCNN part uses only two fully-connected layers, which can be adapted to yield a trade-off between complexity and bit error rate (BER) performance.
It has been demonstrated that the proposed deep convolutional neural network-based detection and demodulation scheme provides better BER performance compared to ZF detector with a reasonable complexity increase.
arXiv Detail & Related papers (2022-02-06T22:18:42Z) - Two-Stage Self-Supervised Cycle-Consistency Network for Reconstruction
of Thin-Slice MR Images [62.4428833931443]
The thick-slice magnetic resonance (MR) images are often structurally blurred in coronal and sagittal views.
Deep learning has shown great potential to re-construct the high-resolution (HR) thin-slice MR images from those low-resolution (LR) cases.
We propose a novel Two-stage Self-supervised Cycle-consistency Network (TSCNet) for MR slice reconstruction.
arXiv Detail & Related papers (2021-06-29T13:29:18Z) - Automated Design of Pulse Sequences for Magnetic Resonance
Fingerprinting using Physics-Inspired Optimization [0.8711988786121446]
Magnetic Resonance Fingerprinting (MRF) is a method to extract quantitative tissue properties such as T1 and T2 relaxation rates from arbitrary pulse sequences.
Here we perform de novo automated design of MRF pulse sequences by applying physics-inspired optimizations.
arXiv Detail & Related papers (2021-06-08T23:50:38Z) - LocalDrop: A Hybrid Regularization for Deep Neural Networks [98.30782118441158]
We propose a new approach for the regularization of neural networks by the local Rademacher complexity called LocalDrop.
A new regularization function for both fully-connected networks (FCNs) and convolutional neural networks (CNNs) has been developed based on the proposed upper bound of the local Rademacher complexity.
arXiv Detail & Related papers (2021-03-01T03:10:11Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.