Probabilistic Decomposed Linear Dynamical Systems for Robust Discovery of Latent Neural Dynamics
- URL: http://arxiv.org/abs/2408.16862v2
- Date: Mon, 28 Oct 2024 15:34:18 GMT
- Title: Probabilistic Decomposed Linear Dynamical Systems for Robust Discovery of Latent Neural Dynamics
- Authors: Yenho Chen, Noga Mudrik, Kyle A. Johnsen, Sankaraleengam Alagapan, Adam S. Charles, Christopher J. Rozell,
- Abstract summary: Time-varying linear state-space models are powerful tools for obtaining mathematically interpretable representations of neural signals.
Existing methods for latent variable estimation are not robust to dynamical noise and system nonlinearity.
We propose a probabilistic approach to latent variable estimation in decomposed models that improves robustness against dynamical noise.
- Score: 5.841659874892801
- License: http://creativecommons.org/licenses/by-sa/4.0/
- Abstract: Time-varying linear state-space models are powerful tools for obtaining mathematically interpretable representations of neural signals. For example, switching and decomposed models describe complex systems using latent variables that evolve according to simple locally linear dynamics. However, existing methods for latent variable estimation are not robust to dynamical noise and system nonlinearity due to noise-sensitive inference procedures and limited model formulations. This can lead to inconsistent results on signals with similar dynamics, limiting the model's ability to provide scientific insight. In this work, we address these limitations and propose a probabilistic approach to latent variable estimation in decomposed models that improves robustness against dynamical noise. Additionally, we introduce an extended latent dynamics model to improve robustness against system nonlinearities. We evaluate our approach on several synthetic dynamical systems, including an empirically-derived brain-computer interface experiment, and demonstrate more accurate latent variable inference in nonlinear systems with diverse noise conditions. Furthermore, we apply our method to a real-world clinical neurophysiology dataset, illustrating the ability to identify interpretable and coherent structure where previous models cannot.
Related papers
- Identifiable Representation and Model Learning for Latent Dynamic Systems [0.0]
We study the problem of identifiable representation and model learning for latent dynamic systems.
We prove that, for linear or affine nonlinear latent dynamic systems, it is possible to identify the representations up to scaling and determine the models up to some simple transformations.
arXiv Detail & Related papers (2024-10-23T13:55:42Z) - Modeling Latent Neural Dynamics with Gaussian Process Switching Linear Dynamical Systems [2.170477444239546]
We develop an approach that balances these two objectives: the Gaussian Process Switching Linear Dynamical System (gpSLDS)
Our method builds on previous work modeling the latent state evolution via a differential equation whose nonlinear dynamics are described by a Gaussian process (GP-SDEs)
Our approach resolves key limitations of the rSLDS such as artifactual oscillations in dynamics near discrete state boundaries, while also providing posterior uncertainty estimates of the dynamics.
arXiv Detail & Related papers (2024-07-19T15:32:15Z) - eXponential FAmily Dynamical Systems (XFADS): Large-scale nonlinear Gaussian state-space modeling [9.52474299688276]
We introduce a low-rank structured variational autoencoder framework for nonlinear state-space graphical models.
We show that our approach consistently demonstrates the ability to learn a more predictive generative model.
arXiv Detail & Related papers (2024-03-03T02:19:49Z) - Individualized Dosing Dynamics via Neural Eigen Decomposition [51.62933814971523]
We introduce the Neural Eigen Differential Equation algorithm (NESDE)
NESDE provides individualized modeling, tunable generalization to new treatment policies, and fast, continuous, closed-form prediction.
We demonstrate the robustness of NESDE in both synthetic and real medical problems, and use the learned dynamics to publish simulated medical gym environments.
arXiv Detail & Related papers (2023-06-24T17:01:51Z) - Capturing dynamical correlations using implicit neural representations [85.66456606776552]
We develop an artificial intelligence framework which combines a neural network trained to mimic simulated data from a model Hamiltonian with automatic differentiation to recover unknown parameters from experimental data.
In doing so, we illustrate the ability to build and train a differentiable model only once, which then can be applied in real-time to multi-dimensional scattering data.
arXiv Detail & Related papers (2023-04-08T07:55:36Z) - Decomposed Linear Dynamical Systems (dLDS) for learning the latent
components of neural dynamics [6.829711787905569]
We propose a new decomposed dynamical system model that represents complex non-stationary and nonlinear dynamics of time series data.
Our model is trained through a dictionary learning procedure, where we leverage recent results in tracking sparse vectors over time.
In both continuous-time and discrete-time instructional examples we demonstrate that our model can well approximate the original system.
arXiv Detail & Related papers (2022-06-07T02:25:38Z) - Capturing Actionable Dynamics with Structured Latent Ordinary
Differential Equations [68.62843292346813]
We propose a structured latent ODE model that captures system input variations within its latent representation.
Building on a static variable specification, our model learns factors of variation for each input to the system, thus separating the effects of the system inputs in the latent space.
arXiv Detail & Related papers (2022-02-25T20:00:56Z) - EINNs: Epidemiologically-Informed Neural Networks [75.34199997857341]
We introduce a new class of physics-informed neural networks-EINN-crafted for epidemic forecasting.
We investigate how to leverage both the theoretical flexibility provided by mechanistic models as well as the data-driven expressability afforded by AI models.
arXiv Detail & Related papers (2022-02-21T18:59:03Z) - Constructing Neural Network-Based Models for Simulating Dynamical
Systems [59.0861954179401]
Data-driven modeling is an alternative paradigm that seeks to learn an approximation of the dynamics of a system using observations of the true system.
This paper provides a survey of the different ways to construct models of dynamical systems using neural networks.
In addition to the basic overview, we review the related literature and outline the most significant challenges from numerical simulations that this modeling paradigm must overcome.
arXiv Detail & Related papers (2021-11-02T10:51:42Z) - Neural Dynamic Mode Decomposition for End-to-End Modeling of Nonlinear
Dynamics [49.41640137945938]
We propose a neural dynamic mode decomposition for estimating a lift function based on neural networks.
With our proposed method, the forecast error is backpropagated through the neural networks and the spectral decomposition.
Our experiments demonstrate the effectiveness of our proposed method in terms of eigenvalue estimation and forecast performance.
arXiv Detail & Related papers (2020-12-11T08:34:26Z) - Tensorized Transformer for Dynamical Systems Modeling [0.0]
We establish a parallel between the dynamical systems modeling and language modeling tasks.
We propose a transformer-based model that incorporates geometrical properties of the data.
We provide an iterative training algorithm allowing the fine-grid approximation of the conditional probabilities of high-dimensional dynamical systems.
arXiv Detail & Related papers (2020-06-05T13:43:37Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.