DDTracking: A Deep Generative Framework for Diffusion MRI Tractography with Streamline Local-Global Spatiotemporal Modeling
- URL: http://arxiv.org/abs/2508.04568v1
- Date: Wed, 06 Aug 2025 15:51:11 GMT
- Title: DDTracking: A Deep Generative Framework for Diffusion MRI Tractography with Streamline Local-Global Spatiotemporal Modeling
- Authors: Yijie Li, Wei Zhang, Xi Zhu, Ye Wu, Yogesh Rathi, Lauren J. O'Donnell, Fan Zhang,
- Abstract summary: DDTracking is a novel deep generative framework for diffusion MRI tractography.<n>We introduce a dual-pathway encoding network that jointly models local spatial encoding and global temporal dependencies.<n> DDTracking offers anatomically plausible and robust tractography, presenting a scalable, adaptable, and end-to-end learnable solution for broad dMRI applications.
- Score: 9.125067735207887
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: This paper presents DDTracking, a novel deep generative framework for diffusion MRI tractography that formulates streamline propagation as a conditional denoising diffusion process. In DDTracking, we introduce a dual-pathway encoding network that jointly models local spatial encoding (capturing fine-scale structural details at each streamline point) and global temporal dependencies (ensuring long-range consistency across the entire streamline). Furthermore, we design a conditional diffusion model module, which leverages the learned local and global embeddings to predict streamline propagation orientations for tractography in an end-to-end trainable manner. We conduct a comprehensive evaluation across diverse, independently acquired dMRI datasets, including both synthetic and clinical data. Experiments on two well-established benchmarks with ground truth (ISMRM Challenge and TractoInferno) demonstrate that DDTracking largely outperforms current state-of-the-art tractography methods. Furthermore, our results highlight DDTracking's strong generalizability across heterogeneous datasets, spanning varying health conditions, age groups, imaging protocols, and scanner types. Collectively, DDTracking offers anatomically plausible and robust tractography, presenting a scalable, adaptable, and end-to-end learnable solution for broad dMRI applications. Code is available at: https://github.com/yishengpoxiao/DDtracking.git
Related papers
- Robust Noisy Pseudo-label Learning for Semi-supervised Medical Image Segmentation Using Diffusion Model [5.158113225132093]
Semi-supervised medical image segmentation aims to leverage limited annotated data alongside abundant unlabeled data to achieve accurate segmentation.<n>Existing methods often struggle to structure semantic distributions in the latent space due to noise introduced by pseudo-labels.<n>Our method introduces a constraint into the latent structure of semantic labels during the denoising diffusion process by enforcing prototype-based contrastive consistency.
arXiv Detail & Related papers (2025-07-22T10:21:55Z) - X-Drive: Cross-modality consistent multi-sensor data synthesis for driving scenarios [105.16073169351299]
We propose a novel framework, X-DRIVE, to model the joint distribution of point clouds and multi-view images.
Considering the distinct geometrical spaces of the two modalities, X-DRIVE conditions the synthesis of each modality on the corresponding local regions.
X-DRIVE allows for controllable generation through multi-level input conditions, including text, bounding box, image, and point clouds.
arXiv Detail & Related papers (2024-11-02T03:52:12Z) - Memory-efficient High-resolution OCT Volume Synthesis with Cascaded Amortized Latent Diffusion Models [48.87160158792048]
We introduce a cascaded amortized latent diffusion model (CA-LDM) that can synthesis high-resolution OCT volumes in a memory-efficient way.
Experiments on a public high-resolution OCT dataset show that our synthetic data have realistic high-resolution and global features, surpassing the capabilities of existing methods.
arXiv Detail & Related papers (2024-05-26T10:58:22Z) - RF-ULM: Ultrasound Localization Microscopy Learned from Radio-Frequency Wavefronts [7.652037892439504]
Delay-and-sum beamforming leads to irreversible reduction of Radio-Frequency (RF) channel data.
rich contextual information embedded within RF wavefronts offers great promise for guiding Deep Neural Networks (DNNs) in challenging localization scenarios.
We propose to directly localize scatterers in RF channel data using learned feature channel shuffling, non-maximum suppression, and a semi-global convolutional block.
arXiv Detail & Related papers (2023-10-02T18:41:23Z) - Better Generalization of White Matter Tract Segmentation to Arbitrary
Datasets with Scaled Residual Bootstrap [1.30536490219656]
White matter (WM) tract segmentation is a crucial step for brain connectivity studies.
We propose a WM tract segmentation approach that improves the generalization with scaled residual bootstrap.
arXiv Detail & Related papers (2023-09-25T09:31:34Z) - TractCloud: Registration-free tractography parcellation with a novel
local-global streamline point cloud representation [63.842881844791094]
Current tractography parcellation methods rely heavily on registration, but registration inaccuracies can affect parcellation.
We propose TractCloud, a registration-free framework that performs whole-brain tractography parcellation directly in individual subject space.
arXiv Detail & Related papers (2023-07-18T06:35:12Z) - Robust Fiber Orientation Distribution Function Estimation Using Deep Constrained Spherical Deconvolution for Diffusion MRI [9.570365838548073]
A common practice to model the measured DW-MRI signal is via fiber orientation distribution function (fODF)<n> measurement variabilities (e.g., inter- and intra-site variability, hardware performance, and sequence design) are inevitable during the acquisition of DW-MRI.<n>Most existing model-based methods (e.g., constrained spherical deconvolution (CSD)) and learning based methods (e.g., deep learning (DL)) do not explicitly consider such variabilities in fODF modeling.<n>We propose a novel data-driven deep constrained spherical deconvolution method to
arXiv Detail & Related papers (2023-06-05T14:06:40Z) - Cross-Modal Causal Intervention for Medical Report Generation [107.76649943399168]
Radiology Report Generation (RRG) is essential for computer-aided diagnosis and medication guidance.<n> generating accurate lesion descriptions remains challenging due to spurious correlations from visual-linguistic biases.<n>We propose a two-stage framework named CrossModal Causal Representation Learning (CMCRL)<n> Experiments on IU-Xray and MIMIC-CXR show that our CMCRL pipeline significantly outperforms state-of-the-art methods.
arXiv Detail & Related papers (2023-03-16T07:23:55Z) - Q-space Conditioned Translation Networks for Directional Synthesis of
Diffusion Weighted Images from Multi-modal Structural MRI [0.43012765978447565]
We propose a generative adversarial translation framework for high-quality DWI synthesis with arbitrary $q$-space sampling.
Our translation network linearly modulates its internal representations conditioned on continuous $q$-space information.
This approach enables downstream estimation of high-quality microstructural maps from arbitrarily subsampled DWIs.
arXiv Detail & Related papers (2021-06-24T17:09:40Z) - Cross-Modality Brain Tumor Segmentation via Bidirectional
Global-to-Local Unsupervised Domain Adaptation [61.01704175938995]
In this paper, we propose a novel Bidirectional Global-to-Local (BiGL) adaptation framework under a UDA scheme.
Specifically, a bidirectional image synthesis and segmentation module is proposed to segment the brain tumor.
The proposed method outperforms several state-of-the-art unsupervised domain adaptation methods by a large margin.
arXiv Detail & Related papers (2021-05-17T10:11:45Z) - MS-Net: Multi-Site Network for Improving Prostate Segmentation with
Heterogeneous MRI Data [75.73881040581767]
We propose a novel multi-site network (MS-Net) for improving prostate segmentation by learning robust representations.
Our MS-Net improves the performance across all datasets consistently, and outperforms state-of-the-art methods for multi-site learning.
arXiv Detail & Related papers (2020-02-09T14:11:50Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.