Deep Transfer Learning for Texture Classification in Colorectal Cancer
Histology
- URL: http://arxiv.org/abs/2004.01614v1
- Date: Fri, 3 Apr 2020 15:05:36 GMT
- Title: Deep Transfer Learning for Texture Classification in Colorectal Cancer
Histology
- Authors: Srinath Jayachandran, Ashlin Ghosh
- Abstract summary: We use discriminative fine-tuning with one-cycle-policy and apply structure-preserving colour normalization to boost our results.
With achieving state-of-the-art test accuracy of 96.2% we also embark on using deployment friendly architecture called SqueezeNet for memory-limited hardware.
- Score: 0.0
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Microscopic examination of tissues or histopathology is one of the diagnostic
procedures for detecting colorectal cancer. The pathologist involved in such an
examination usually identifies tissue type based on texture analysis,
especially focusing on tumour-stroma ratio. In this work, we automate the task
of tissue classification within colorectal cancer histology samples using deep
transfer learning. We use discriminative fine-tuning with one-cycle-policy and
apply structure-preserving colour normalization to boost our results. We also
provide visual explanations of the deep neural network's decision on texture
classification. With achieving state-of-the-art test accuracy of 96.2% we also
embark on using deployment friendly architecture called SqueezeNet for
memory-limited hardware.
Related papers
- Neural Cellular Automata for Lightweight, Robust and Explainable Classification of White Blood Cell Images [40.347953893940044]
We introduce a novel approach for white blood cell classification based on neural cellular automata (NCA)
Our NCA-based method is significantly smaller in terms of parameters and exhibits robustness to domain shifts.
Our results demonstrate that NCA can be used for image classification, and they address key challenges of conventional methods.
arXiv Detail & Related papers (2024-04-08T14:59:53Z) - Machine-Learning-based Colorectal Tissue Classification via Acoustic
Resolution Photoacoustic Microscopy [3.916910844026426]
Colonoscopy cannot provide detailed information within the tissues affected by cancer, while biopsy involves tissue removal, which can be painful and invasive.
We studied machine-learning approach for colorectal tissue classification that uses acoustic resolution photoacoustic microscopy (ARPAM)
Our results were analyzed both quantitatively and qualitatively to evaluate the effectiveness of our approach.
arXiv Detail & Related papers (2023-07-17T15:15:26Z) - Cross-modulated Few-shot Image Generation for Colorectal Tissue
Classification [58.147396879490124]
Our few-shot generation method, named XM-GAN, takes one base and a pair of reference tissue images as input and generates high-quality yet diverse images.
To the best of our knowledge, we are the first to investigate few-shot generation in colorectal tissue images.
arXiv Detail & Related papers (2023-04-04T17:50:30Z) - Deep CNNs for Peripheral Blood Cell Classification [0.0]
We benchmark 27 popular deep convolutional neural network architectures on the microscopic peripheral blood cell images dataset.
We fine-tune the state-of-the-art image classification models pre-trained on the ImageNet dataset for blood cell classification.
arXiv Detail & Related papers (2021-10-18T17:56:07Z) - Assessing glaucoma in retinal fundus photographs using Deep Feature
Consistent Variational Autoencoders [63.391402501241195]
glaucoma is challenging to detect since it remains asymptomatic until the symptoms are severe.
Early identification of glaucoma is generally made based on functional, structural, and clinical assessments.
Deep learning methods have partially solved this dilemma by bypassing the marker identification stage and analyzing high-level information directly to classify the data.
arXiv Detail & Related papers (2021-10-04T16:06:49Z) - Medulloblastoma Tumor Classification using Deep Transfer Learning with
Multi-Scale EfficientNets [63.62764375279861]
We propose an end-to-end MB tumor classification and explore transfer learning with various input sizes and matching network dimensions.
Using a data set with 161 cases, we demonstrate that pre-trained EfficientNets with larger input resolutions lead to significant performance improvements.
arXiv Detail & Related papers (2021-09-10T13:07:11Z) - Deep Multi-Resolution Dictionary Learning for Histopathology Image
Analysis [1.503974529275767]
We propose a deep dictionary learning approach to solve the problem of tissue phenotyping in histology images.
We show that the proposed framework can employ most off-the-shelf CNNs models to generate effective deep texture descriptors.
arXiv Detail & Related papers (2021-04-01T17:58:18Z) - Deeply supervised UNet for semantic segmentation to assist
dermatopathological assessment of Basal Cell Carcinoma (BCC) [2.031570465477242]
We focus on detecting Basal Cell Carcinoma (BCC) through semantic segmentation using several models based on the UNet architecture.
We analyze two different encoders for the first part of the UNet network and two additional training strategies.
The best model achieves over 96%, accuracy, sensitivity, and specificity on the test set.
arXiv Detail & Related papers (2021-03-05T15:39:55Z) - Hierarchical Cell-to-Tissue Graph Representations for Breast Cancer
Subtyping in Digital Pathology [10.06217305782974]
We propose a novel hierarchical entity-graph representation to depict a tissue specimen.
A hierarchical graph neural network is proposed to operate on the entity-graph representation to map the tissue structure to tissue functionality.
arXiv Detail & Related papers (2021-02-22T14:30:57Z) - Spectral-Spatial Recurrent-Convolutional Networks for In-Vivo
Hyperspectral Tumor Type Classification [49.32653090178743]
We demonstrate the feasibility of in-vivo tumor type classification using hyperspectral imaging and deep learning.
Our best model achieves an AUC of 76.3%, significantly outperforming previous conventional and deep learning methods.
arXiv Detail & Related papers (2020-07-02T12:00:53Z) - Gleason Grading of Histology Prostate Images through Semantic
Segmentation via Residual U-Net [60.145440290349796]
The final diagnosis of prostate cancer is based on the visual detection of Gleason patterns in prostate biopsy by pathologists.
Computer-aided-diagnosis systems allow to delineate and classify the cancerous patterns in the tissue.
The methodological core of this work is a U-Net convolutional neural network for image segmentation modified with residual blocks able to segment cancerous tissue.
arXiv Detail & Related papers (2020-05-22T19:49:10Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.