Residual2Vec: Debiasing graph embedding with random graphs
- URL: http://arxiv.org/abs/2110.07654v1
- Date: Thu, 14 Oct 2021 18:24:11 GMT
- Title: Residual2Vec: Debiasing graph embedding with random graphs
- Authors: Sadamori Kojaku, Jisung Yoon, Isabel Constantino, Yong-Yeol Ahn
- Abstract summary: We propose residual2vec, a general graph embedding method that can debias various structural biases in graphs by using random graphs.
We demonstrate that this debiasing not only improves link prediction and clustering performance but also allows us to explicitly model salient structural properties in graph embedding.
- Score: 1.9280643035418397
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Graph embedding maps a graph into a convenient vector-space representation
for graph analysis and machine learning applications. Many graph embedding
methods hinge on a sampling of context nodes based on random walks. However,
random walks can be a biased sampler due to the structural properties of
graphs. Most notably, random walks are biased by the degree of each node, where
a node is sampled proportionally to its degree. The implication of such biases
has not been clear, particularly in the context of graph representation
learning. Here, we investigate the impact of the random walks' bias on graph
embedding and propose residual2vec, a general graph embedding method that can
debias various structural biases in graphs by using random graphs. We
demonstrate that this debiasing not only improves link prediction and
clustering performance but also allows us to explicitly model salient
structural properties in graph embedding.
Related papers
- Robust Graph Structure Learning under Heterophily [12.557639223778722]
We propose a novel robust graph structure learning method to achieve a high-quality graph from heterophilic data for downstream tasks.
We first apply a high-pass filter to make each node more distinctive from its neighbors by encoding structure information into the node features.
Then, we learn a robust graph with an adaptive norm characterizing different levels of noise.
arXiv Detail & Related papers (2024-03-06T12:29:13Z) - Spectral Augmentations for Graph Contrastive Learning [50.149996923976836]
Contrastive learning has emerged as a premier method for learning representations with or without supervision.
Recent studies have shown its utility in graph representation learning for pre-training.
We propose a set of well-motivated graph transformation operations to provide a bank of candidates when constructing augmentations for a graph contrastive objective.
arXiv Detail & Related papers (2023-02-06T16:26:29Z) - Node Copying: A Random Graph Model for Effective Graph Sampling [35.957719744856696]
We introduce the node copying model for constructing a distribution over graphs.
We show the usefulness of the copying model in three tasks.
We employ our proposed model to mitigate the effect of adversarial attacks on the graph topology.
arXiv Detail & Related papers (2022-08-04T04:04:49Z) - Graph-in-Graph (GiG): Learning interpretable latent graphs in
non-Euclidean domain for biological and healthcare applications [52.65389473899139]
Graphs are a powerful tool for representing and analyzing unstructured, non-Euclidean data ubiquitous in the healthcare domain.
Recent works have shown that considering relationships between input data samples have a positive regularizing effect for the downstream task.
We propose Graph-in-Graph (GiG), a neural network architecture for protein classification and brain imaging applications.
arXiv Detail & Related papers (2022-04-01T10:01:37Z) - Neighborhood Random Walk Graph Sampling for Regularized Bayesian Graph
Convolutional Neural Networks [0.6236890292833384]
In this paper, we propose a novel algorithm called Bayesian Graph Convolutional Network using Neighborhood Random Walk Sampling (BGCN-NRWS)
BGCN-NRWS uses a Markov Chain Monte Carlo (MCMC) based graph sampling algorithm utilizing graph structure, reduces overfitting by using a variational inference layer, and yields consistently competitive classification results compared to the state-of-the-art in semi-supervised node classification.
arXiv Detail & Related papers (2021-12-14T20:58:27Z) - Unbiased Graph Embedding with Biased Graph Observations [52.82841737832561]
We propose a principled new way for obtaining unbiased representations by learning from an underlying bias-free graph.
Based on this new perspective, we propose two complementary methods for uncovering such an underlying graph.
arXiv Detail & Related papers (2021-10-26T18:44:37Z) - Line Graph Neural Networks for Link Prediction [71.00689542259052]
We consider the graph link prediction task, which is a classic graph analytical problem with many real-world applications.
In this formalism, a link prediction problem is converted to a graph classification task.
We propose to seek a radically different and novel path by making use of the line graphs in graph theory.
In particular, each node in a line graph corresponds to a unique edge in the original graph. Therefore, link prediction problems in the original graph can be equivalently solved as a node classification problem in its corresponding line graph, instead of a graph classification task.
arXiv Detail & Related papers (2020-10-20T05:54:31Z) - Non-Parametric Graph Learning for Bayesian Graph Neural Networks [35.88239188555398]
We propose a novel non-parametric graph model for constructing the posterior distribution of graph adjacency matrices.
We demonstrate the advantages of this model in three different problem settings: node classification, link prediction and recommendation.
arXiv Detail & Related papers (2020-06-23T21:10:55Z) - Graph Pooling with Node Proximity for Hierarchical Representation
Learning [80.62181998314547]
We propose a novel graph pooling strategy that leverages node proximity to improve the hierarchical representation learning of graph data with their multi-hop topology.
Results show that the proposed graph pooling strategy is able to achieve state-of-the-art performance on a collection of public graph classification benchmark datasets.
arXiv Detail & Related papers (2020-06-19T13:09:44Z) - Block-Approximated Exponential Random Graphs [77.4792558024487]
An important challenge in the field of exponential random graphs (ERGs) is the fitting of non-trivial ERGs on large graphs.
We propose an approximative framework to such non-trivial ERGs that result in dyadic independence (i.e., edge independent) distributions.
Our methods are scalable to sparse graphs consisting of millions of nodes.
arXiv Detail & Related papers (2020-02-14T11:42:16Z) - The Power of Graph Convolutional Networks to Distinguish Random Graph
Models: Short Version [27.544219236164764]
Graph convolutional networks (GCNs) are a widely used method for graph representation learning.
We investigate the power of GCNs to distinguish between different random graph models on the basis of the embeddings of their sample graphs.
arXiv Detail & Related papers (2020-02-13T17:58:42Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.