Dynamic Mode Decomposition for data-driven analysis and reduced-order
modelling of ExB plasmas: I. Extraction of spatiotemporally coherent patterns
- URL: http://arxiv.org/abs/2308.13726v1
- Date: Sat, 26 Aug 2023 01:37:52 GMT
- Title: Dynamic Mode Decomposition for data-driven analysis and reduced-order
modelling of ExB plasmas: I. Extraction of spatiotemporally coherent patterns
- Authors: Farbod Faraji, Maryam Reza, Aaron Knoll, J. Nathan Kutz
- Abstract summary: We evaluate the generalability of the Dynamic Mode Decomposition (DMD) algorithm for data-driven analysis and reduced-order modelling of plasma dynamics.
- Score: 3.203036813451742
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: In this two-part article, we evaluate the utility and the generalizability of
the Dynamic Mode Decomposition (DMD) algorithm for data-driven analysis and
reduced-order modelling of plasma dynamics in cross-field ExB configurations.
The DMD algorithm is an interpretable data-driven method that finds a best-fit
linear model describing the time evolution of spatiotemporally coherent
structures (patterns) in data. We have applied the DMD to extensive
high-fidelity datasets generated using a particle-in-cell (PIC) code based on a
cost-efficient reduced-order PIC scheme. In this part, we first provide an
overview of the concept of DMD and its underpinning Proper Orthogonal and
Singular Value Decomposition methods. Two of the main DMD variants are next
introduced. We then present and discuss the results of the DMD application in
terms of the identification and extraction of the dominant spatiotemporal modes
from high-fidelity data over a range of simulation conditions. We demonstrate
that the DMD variant based on variable projection optimization (OPT-DMD)
outperforms the basic DMD method in identification of the modes underlying the
data, leading to notably more reliable reconstruction of the ground-truth.
Furthermore, we show in multiple test cases that the discrete frequency
spectrum of OPT-DMD-extracted modes is consistent with the temporal spectrum
from the Fast Fourier Transform of the data. This observation implies that the
OPT-DMD augments the conventional spectral analyses by being able to uniquely
reveal the spatial structure of the dominant modes in the frequency spectra,
thus, yielding more accessible, comprehensive information on the spatiotemporal
characteristics of the plasma phenomena.
Related papers
- Grassmannian Geometry Meets Dynamic Mode Decomposition in DMD-GEN: A New Metric for Mode Collapse in Time Series Generative Models [0.0]
Generative models like Generative Adversarial Networks (GANs) and Variational Autoencoders (Es) often fail to capture the full diversity of their training data, leading to mode collapse.
We introduce a new definition of mode collapse specific to time series and propose a novel metric, DMD-GEN, to quantify its severity.
arXiv Detail & Related papers (2024-12-15T19:53:17Z) - Multi-Source and Test-Time Domain Adaptation on Multivariate Signals using Spatio-Temporal Monge Alignment [59.75420353684495]
Machine learning applications on signals such as computer vision or biomedical data often face challenges due to the variability that exists across hardware devices or session recordings.
In this work, we propose Spatio-Temporal Monge Alignment (STMA) to mitigate these variabilities.
We show that STMA leads to significant and consistent performance gains between datasets acquired with very different settings.
arXiv Detail & Related papers (2024-07-19T13:33:38Z) - Synthesizing Multimodal Electronic Health Records via Predictive Diffusion Models [69.06149482021071]
We propose a novel EHR data generation model called EHRPD.
It is a diffusion-based model designed to predict the next visit based on the current one while also incorporating time interval estimation.
We conduct experiments on two public datasets and evaluate EHRPD from fidelity, privacy, and utility perspectives.
arXiv Detail & Related papers (2024-06-20T02:20:23Z) - Entropic Regression DMD (ERDMD) Discovers Informative Sparse and Nonuniformly Time Delayed Models [0.0]
We present a method which determines optimal multi-step dynamic mode decomposition models via entropic regression.
We develop a method that produces high fidelity time-delay DMD models that allow for nonuniform time space.
These models are shown to be highly efficient and robust.
arXiv Detail & Related papers (2024-06-17T20:02:43Z) - Synthetic location trajectory generation using categorical diffusion
models [50.809683239937584]
Diffusion models (DPMs) have rapidly evolved to be one of the predominant generative models for the simulation of synthetic data.
We propose using DPMs for the generation of synthetic individual location trajectories (ILTs) which are sequences of variables representing physical locations visited by individuals.
arXiv Detail & Related papers (2024-02-19T15:57:39Z) - ArSDM: Colonoscopy Images Synthesis with Adaptive Refinement Semantic
Diffusion Models [69.9178140563928]
Colonoscopy analysis is essential for assisting clinical diagnosis and treatment.
The scarcity of annotated data limits the effectiveness and generalization of existing methods.
We propose an Adaptive Refinement Semantic Diffusion Model (ArSDM) to generate colonoscopy images that benefit the downstream tasks.
arXiv Detail & Related papers (2023-09-03T07:55:46Z) - Dynamic Mode Decomposition for data-driven analysis and reduced-order
modelling of ExB plasmas: II. dynamics forecasting [3.203036813451742]
We develop a variant of the Dynamic Mode Decomposition (DMD) algorithm based on variable projection optimization, called Optimized Dynamic Mode Decomposition (OPT-DMD)
We extend the application of the OPT-DMD and investigate the capabilities of the linear ROM from this algorithm toward forecasting in time of the plasma dynamics.
Despite its limitation in terms of generalized applicability to all plasma conditions, the OPT-DMD is proven as a reliable method to develop low computational cost and highly predictive data-driven reduced-order models.
arXiv Detail & Related papers (2023-08-26T01:48:29Z) - Mixed Effects Neural ODE: A Variational Approximation for Analyzing the
Dynamics of Panel Data [50.23363975709122]
We propose a probabilistic model called ME-NODE to incorporate (fixed + random) mixed effects for analyzing panel data.
We show that our model can be derived using smooth approximations of SDEs provided by the Wong-Zakai theorem.
We then derive Evidence Based Lower Bounds for ME-NODE, and develop (efficient) training algorithms.
arXiv Detail & Related papers (2022-02-18T22:41:51Z) - Dynamic Mode Decomposition in Adaptive Mesh Refinement and Coarsening
Simulations [58.720142291102135]
Dynamic Mode Decomposition (DMD) is a powerful data-driven method used to extract coherent schemes.
This paper proposes a strategy to enable DMD to extract from observations with different mesh topologies and dimensions.
arXiv Detail & Related papers (2021-04-28T22:14:25Z) - Discriminant Dynamic Mode Decomposition for Labeled Spatio-Temporal Data
Collections [16.69145658813375]
We propose a new method for extracting coherent patterns from labeled-temporal data collections.
We achieve such pattern extraction by incorporating discriminant analysis into Dynamic mode decomposition.
We illustrate our method using a synthetic dataset and several real-world datasets.
arXiv Detail & Related papers (2021-02-19T15:12:59Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.