MOAB: Multi-Modal Outer Arithmetic Block For Fusion Of Histopathological
Images And Genetic Data For Brain Tumor Grading
- URL: http://arxiv.org/abs/2403.06349v1
- Date: Mon, 11 Mar 2024 00:33:28 GMT
- Title: MOAB: Multi-Modal Outer Arithmetic Block For Fusion Of Histopathological
Images And Genetic Data For Brain Tumor Grading
- Authors: Omnia Alwazzan (1 and 2), Abbas Khan (1 and 2), Ioannis Patras (1 and
2), Gregory Slabaugh (1 and 2) ((1) School of Electronic Engineering and
Computer Science, Queen Mary University of London, UK, (2) Queen Mary Digital
Environment Research Institute (DERI), London, UK)
- Abstract summary: Brain tumors can be classified into distinct grades based on their growth.
grading is performed based on a histological image and is one of the most significant predictors of a patients prognosis.
We propose a novel Multi-modal Outer Arithmetic Block (MOAB) based on arithmetic operations to combine latent representations of the different modalities for predicting the tumor grade.
- Score: 0.0
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Brain tumors are an abnormal growth of cells in the brain. They can be
classified into distinct grades based on their growth. Often grading is
performed based on a histological image and is one of the most significant
predictors of a patients prognosis, the higher the grade, the more aggressive
the tumor. Correct diagnosis of a tumor grade remains challenging. Though
histopathological grading has been shown to be prognostic, results are subject
to interobserver variability, even among experienced pathologists. Recently,
the World Health Organization reported that advances in molecular genetics have
led to improvements in tumor classification. This paper seeks to integrate
histological images and genetic data for improved computer-aided diagnosis. We
propose a novel Multi-modal Outer Arithmetic Block (MOAB) based on arithmetic
operations to combine latent representations of the different modalities for
predicting the tumor grade (Grade \rom{2}, \rom{3} and \rom{4}). Extensive
experiments evaluate the effectiveness of our approach. By applying MOAB to The
Cancer Genome Atlas (TCGA) glioma dataset, we show that it can improve
separation between similar classes (Grade \rom{2} and \rom{3}) and outperform
prior state-of-the-art grade classification techniques.
Related papers
- Block Graph Neural Networks for tumor heterogeneity prediction [0.3611754783778107]
Accurate tumor classification is essential for selecting effective treatments.
Standard tumor grading, which categorizes tumors based on cell differentiation, is not recommended as a stand-alone procedure.
We propose to build on a mathematical model that simulates tumor evolution and generate artificial datasets for tumor classification.
arXiv Detail & Related papers (2025-02-08T05:48:09Z) - Unified HT-CNNs Architecture: Transfer Learning for Segmenting Diverse Brain Tumors in MRI from Gliomas to Pediatric Tumors [2.104687387907779]
We introduce HT-CNNs, an ensemble of Hybrid Transformers and Convolutional Neural Networks optimized through transfer learning for varied brain tumor segmentation.
This method captures spatial and contextual details from MRI data, fine-tuned on diverse datasets representing common tumor types.
Our findings underscore the potential of transfer learning and ensemble approaches in medical image segmentation, indicating a substantial enhancement in clinical decision-making and patient care.
arXiv Detail & Related papers (2024-12-11T09:52:01Z) - Comparative Evaluation of Transfer Learning for Classification of Brain
Tumor Using MRI [0.5235143203977018]
Brain cancer diagnosis has been considerably expedited by the field of computer-assisted diagnostics.
In our study, we categorize three different kinds of brain tumors using four transfer learning techniques.
Our models were tested on a benchmark dataset of $3064$ MRI pictures representing three different forms of brain cancer.
arXiv Detail & Related papers (2023-09-24T03:46:38Z) - Automated Ensemble-Based Segmentation of Adult Brain Tumors: A Novel
Approach Using the BraTS AFRICA Challenge Data [0.0]
We introduce an ensemble method that comprises eleven unique variations based on three core architectures.
Our findings reveal that the ensemble approach, combining different architectures, outperforms single models.
These results underline the potential of tailored deep learning techniques in precisely segmenting brain tumors.
arXiv Detail & Related papers (2023-08-14T15:34:22Z) - Prediction of brain tumor recurrence location based on multi-modal
fusion and nonlinear correlation learning [55.789874096142285]
We present a deep learning-based brain tumor recurrence location prediction network.
We first train a multi-modal brain tumor segmentation network on the public dataset BraTS 2021.
Then, the pre-trained encoder is transferred to our private dataset for extracting the rich semantic features.
Two decoders are constructed to jointly segment the present brain tumor and predict its future tumor recurrence location.
arXiv Detail & Related papers (2023-04-11T02:45:38Z) - Learn-Morph-Infer: a new way of solving the inverse problem for brain
tumor modeling [1.1214822628210914]
We introduce a methodology for inferring patient-specific spatial distribution of brain tumor from T1Gd and FLAIR MRI medical scans.
Coined as itLearn-Morph-Infer, the method achieves real-time performance in the order of minutes on widely available hardware.
arXiv Detail & Related papers (2021-11-07T13:45:35Z) - Multi-Scale Input Strategies for Medulloblastoma Tumor Classification
using Deep Transfer Learning [59.30734371401316]
Medulloblastoma is the most common malignant brain cancer among children.
CNN has shown promising results for MB subtype classification.
We study the impact of tile size and input strategy.
arXiv Detail & Related papers (2021-09-14T09:42:37Z) - Medulloblastoma Tumor Classification using Deep Transfer Learning with
Multi-Scale EfficientNets [63.62764375279861]
We propose an end-to-end MB tumor classification and explore transfer learning with various input sizes and matching network dimensions.
Using a data set with 161 cases, we demonstrate that pre-trained EfficientNets with larger input resolutions lead to significant performance improvements.
arXiv Detail & Related papers (2021-09-10T13:07:11Z) - Triplet Contrastive Learning for Brain Tumor Classification [99.07846518148494]
We present a novel approach of directly learning deep embeddings for brain tumor types, which can be used for downstream tasks such as classification.
We evaluate our method on an extensive brain tumor dataset which consists of 27 different tumor classes, out of which 13 are defined as rare.
arXiv Detail & Related papers (2021-08-08T11:26:34Z) - SAG-GAN: Semi-Supervised Attention-Guided GANs for Data Augmentation on
Medical Images [47.35184075381965]
We present a data augmentation method for generating synthetic medical images using cycle-consistency Generative Adversarial Networks (GANs)
The proposed GANs-based model can generate a tumor image from a normal image, and in turn, it can also generate a normal image from a tumor image.
We train the classification model using real images with classic data augmentation methods and classification models using synthetic images.
arXiv Detail & Related papers (2020-11-15T14:01:24Z) - Modality-Pairing Learning for Brain Tumor Segmentation [34.58078431696929]
We propose a novel end-to-end Modality-Pairing learning method for brain tumor segmentation.
Our method is tested on the BraTS 2020 online testing dataset, obtaining promising segmentation performance.
arXiv Detail & Related papers (2020-10-19T07:42:10Z) - Scale-Space Autoencoders for Unsupervised Anomaly Segmentation in Brain
MRI [47.26574993639482]
We show improved anomaly segmentation performance and the general capability to obtain much more crisp reconstructions of input data at native resolution.
The modeling of the laplacian pyramid further enables the delineation and aggregation of lesions at multiple scales.
arXiv Detail & Related papers (2020-06-23T09:20:42Z) - Stan: Small tumor-aware network for breast ultrasound image segmentation [68.8204255655161]
We propose a novel deep learning architecture called Small Tumor-Aware Network (STAN) to improve the performance of segmenting tumors with different size.
The proposed approach outperformed the state-of-the-art approaches in segmenting small breast tumors.
arXiv Detail & Related papers (2020-02-03T22:25:01Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.