GuideGen: A Text-guided Framework for Joint CT Volume and Anatomical structure Generation

• URL: http://arxiv.org/abs/2403.07247v1
• Date: Tue, 12 Mar 2024 02:09:39 GMT
• Title: GuideGen: A Text-guided Framework for Joint CT Volume and Anatomical structure Generation
• Authors: Linrui Dai, Rongzhao Zhang, Zhongzhen Huang, Xiaofan Zhang
• Abstract summary: We present textbfGuideGen: a pipeline that jointly generates CT images and tissue masks for abdominal organs and colorectal cancer conditioned on a text prompt. Our pipeline guarantees high fidelity and variability as well as exact alignment between generated CT volumes and tissue masks.
• Score: 2.062999694458006
• License: http://creativecommons.org/licenses/by-nc-nd/4.0/
• Abstract: The annotation burden and extensive labor for gathering a large medical dataset with images and corresponding labels are rarely cost-effective and highly intimidating. This results in a lack of abundant training data that undermines downstream tasks and partially contributes to the challenge image analysis faces in the medical field. As a workaround, given the recent success of generative neural models, it is now possible to synthesize image datasets at a high fidelity guided by external constraints. This paper explores this possibility and presents \textbf{GuideGen}: a pipeline that jointly generates CT images and tissue masks for abdominal organs and colorectal cancer conditioned on a text prompt. Firstly, we introduce Volumetric Mask Sampler to fit the discrete distribution of mask labels and generate low-resolution 3D tissue masks. Secondly, our Conditional Image Generator autoregressively generates CT slices conditioned on a corresponding mask slice to incorporate both style information and anatomical guidance. This pipeline guarantees high fidelity and variability as well as exact alignment between generated CT volumes and tissue masks. Both qualitative and quantitative experiments on 3D abdominal CTs demonstrate a high performance of our proposed pipeline, thereby proving our method can serve as a dataset generator and provide potential benefits to downstream tasks. It is hoped that our work will offer a promising solution on the multimodality generation of CT and its anatomical mask. Our source code is publicly available at https://github.com/OvO1111/JointImageGeneration.

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