External Attention Assisted Multi-Phase Splenic Vascular Injury
Segmentation with Limited Data
- URL: http://arxiv.org/abs/2201.00942v1
- Date: Tue, 4 Jan 2022 02:35:56 GMT
- Title: External Attention Assisted Multi-Phase Splenic Vascular Injury
Segmentation with Limited Data
- Authors: Yuyin Zhou, David Dreizin, Yan Wang, Fengze Liu, Wei Shen, Alan L.
Yuille
- Abstract summary: The spleen is one of the most commonly injured solid organs in blunt abdominal trauma.
accurate segmentation of splenic vascular injury is challenging for the following reasons.
- Score: 72.99534552950138
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: The spleen is one of the most commonly injured solid organs in blunt
abdominal trauma. The development of automatic segmentation systems from
multi-phase CT for splenic vascular injury can augment severity grading for
improving clinical decision support and outcome prediction. However, accurate
segmentation of splenic vascular injury is challenging for the following
reasons: 1) Splenic vascular injury can be highly variant in shape, texture,
size, and overall appearance; and 2) Data acquisition is a complex and
expensive procedure that requires intensive efforts from both data scientists
and radiologists, which makes large-scale well-annotated datasets hard to
acquire in general.
In light of these challenges, we hereby design a novel framework for
multi-phase splenic vascular injury segmentation, especially with limited data.
On the one hand, we propose to leverage external data to mine pseudo splenic
masks as the spatial attention, dubbed external attention, for guiding the
segmentation of splenic vascular injury. On the other hand, we develop a
synthetic phase augmentation module, which builds upon generative adversarial
networks, for populating the internal data by fully leveraging the relation
between different phases. By jointly enforcing external attention and
populating internal data representation during training, our proposed method
outperforms other competing methods and substantially improves the popular
DeepLab-v3+ baseline by more than 7% in terms of average DSC, which confirms
its effectiveness.
Related papers
- ICH-SCNet: Intracerebral Hemorrhage Segmentation and Prognosis Classification Network Using CLIP-guided SAM mechanism [12.469269425813607]
Intracerebral hemorrhage (ICH) is the most fatal subtype of stroke and is characterized by a high incidence of disability.
Existing approaches address these two tasks independently and predominantly focus on imaging data alone.
This paper introduces a multi-task network, ICH-SCNet, designed for both ICH segmentation and prognosis classification.
arXiv Detail & Related papers (2024-11-07T12:34:25Z) - Improving Limited Supervised Foot Ulcer Segmentation Using Cross-Domain
Augmentation [16.50491209336004]
Diabetic foot ulcers pose health risks, including higher morbidity, mortality, and amputation rates.
Monitoring wound areas is crucial for proper care, but manual segmentation is subjective due to complex wound features and background variation.
We propose a cross-domain augmentation method named TransMix that combines Augmented Global Pre-training AGP and Localized CutMix Fine-tuning LCF to enrich wound segmentation data for model learning.
arXiv Detail & Related papers (2024-01-16T15:08:38Z) - Leveraging Frequency Domain Learning in 3D Vessel Segmentation [50.54833091336862]
In this study, we leverage Fourier domain learning as a substitute for multi-scale convolutional kernels in 3D hierarchical segmentation models.
We show that our novel network achieves remarkable dice performance (84.37% on ASACA500 and 80.32% on ImageCAS) in tubular vessel segmentation tasks.
arXiv Detail & Related papers (2024-01-11T19:07:58Z) - Deep Learning for Vascular Segmentation and Applications in Phase
Contrast Tomography Imaging [33.23991248643144]
We present a thorough literature review, highlighting the state of machine learning techniques across diverse organs.
Our goal is to provide a foundation on the topic and identify a robust baseline model for application to vascular segmentation in a new imaging modality.
HiP CT enables 3D imaging of complete organs at an unprecedented resolution of ca. 20mm per voxel.
arXiv Detail & Related papers (2023-11-22T11:15:38Z) - Uncertainty Driven Bottleneck Attention U-net for Organ at Risk
Segmentation [20.865775626533434]
Organ at risk (OAR) segmentation in computed tomography (CT) imagery is a difficult task for automated segmentation methods.
We propose a multiple decoder U-net architecture and use the segmentation disagreement between the decoders as attention to the bottleneck of the network.
For accurate segmentation, we also proposed a CT intensity integrated regularization loss.
arXiv Detail & Related papers (2023-03-19T23:45:32Z) - Reliable Joint Segmentation of Retinal Edema Lesions in OCT Images [55.83984261827332]
In this paper, we propose a novel reliable multi-scale wavelet-enhanced transformer network.
We develop a novel segmentation backbone that integrates a wavelet-enhanced feature extractor network and a multi-scale transformer module.
Our proposed method achieves better segmentation accuracy with a high degree of reliability as compared to other state-of-the-art segmentation approaches.
arXiv Detail & Related papers (2022-12-01T07:32:56Z) - FetReg: Placental Vessel Segmentation and Registration in Fetoscopy
Challenge Dataset [57.30136148318641]
Fetoscopy laser photocoagulation is a widely used procedure for the treatment of Twin-to-Twin Transfusion Syndrome (TTTS)
This may lead to increased procedural time and incomplete ablation, resulting in persistent TTTS.
Computer-assisted intervention may help overcome these challenges by expanding the fetoscopic field of view through video mosaicking and providing better visualization of the vessel network.
We present a large-scale multi-centre dataset for the development of generalized and robust semantic segmentation and video mosaicking algorithms for the fetal environment with a focus on creating drift-free mosaics from long duration fetoscopy videos.
arXiv Detail & Related papers (2021-06-10T17:14:27Z) - FocusNetv2: Imbalanced Large and Small Organ Segmentation with
Adversarial Shape Constraint for Head and Neck CT Images [82.48587399026319]
delineation of organs-at-risk (OARs) is a vital step in radiotherapy treatment planning to avoid damage to healthy organs.
We propose a novel two-stage deep neural network, FocusNetv2, to solve this challenging problem by automatically locating, ROI-pooling, and segmenting small organs.
In addition to our original FocusNet, we employ a novel adversarial shape constraint on small organs to ensure the consistency between estimated small-organ shapes and organ shape prior knowledge.
arXiv Detail & Related papers (2021-04-05T04:45:31Z) - Inf-Net: Automatic COVID-19 Lung Infection Segmentation from CT Images [152.34988415258988]
Automated detection of lung infections from computed tomography (CT) images offers a great potential to augment the traditional healthcare strategy for tackling COVID-19.
segmenting infected regions from CT slices faces several challenges, including high variation in infection characteristics, and low intensity contrast between infections and normal tissues.
To address these challenges, a novel COVID-19 Deep Lung Infection Network (Inf-Net) is proposed to automatically identify infected regions from chest CT slices.
arXiv Detail & Related papers (2020-04-22T07:30:56Z) - AttentionAnatomy: A unified framework for whole-body organs at risk
segmentation using multiple partially annotated datasets [30.23917416966188]
Organs-at-risk (OAR) delineation in computed tomography (CT) is an important step in Radiation Therapy (RT) planning.
Our proposed end-to-end convolutional neural network model, called textbfAttentionAnatomy, can be jointly trained with three partially annotated datasets.
Experimental results of our proposed framework presented significant improvements in both Sorensen-Dice coefficient (DSC) and 95% Hausdorff distance.
arXiv Detail & Related papers (2020-01-13T18:31:34Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.