Perfusion imaging in deep prostate cancer detection from mp-MRI: can we
take advantage of it?
- URL: http://arxiv.org/abs/2207.02854v1
- Date: Wed, 6 Jul 2022 07:55:46 GMT
- Title: Perfusion imaging in deep prostate cancer detection from mp-MRI: can we
take advantage of it?
- Authors: Audrey Duran (MYRIAD), Gaspard Dussert (MYRIAD), Carole Lartizien
(MYRIAD)
- Abstract summary: We evaluate strategies to integrate information from perfusion imaging in deep neural architectures.
Perfusion maps from dynamic contrast enhanced MR exams are shown to positively impact segmentation and grading performance of PCa lesions.
- Score: 0.0
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: To our knowledge, all deep computer-aided detection and diagnosis (CAD)
systems for prostate cancer (PCa) detection consider bi-parametric magnetic
resonance imaging (bp-MRI) only, including T2w and ADC sequences while
excluding the 4D perfusion sequence,which is however part of standard clinical
protocols for this diagnostic task. In this paper, we question strategies to
integrate information from perfusion imaging in deep neural architectures. To
do so, we evaluate several ways to encode the perfusion information in a U-Net
like architecture, also considering early versus mid fusion strategies. We
compare performance of multiparametric MRI (mp-MRI) models with the baseline
bp-MRI model based on a private dataset of 219 mp-MRI exams. Perfusion maps
derived from dynamic contrast enhanced MR exams are shown to positively impact
segmentation and grading performance of PCa lesions, especially the 3D MR
volume corresponding to the maximum slope of the wash-in curve as well as Tmax
perfusion maps. The latter mp-MRI models indeed outperform the bp-MRI one
whatever the fusion strategy, with Cohen's kappa score of 0.318$\pm$0.019 for
the bp-MRI model and 0.378 $\pm$ 0.033 for the model including the maximum
slope with a mid fusion strategy, also achieving competitive Cohen's kappa
score compared to state of the art.
Related papers
- A Diffusion-based Xray2MRI Model: Generating Pseudo-MRI Volumes From one Single X-ray [6.014316825270666]
We introduce a novel diffusion-based Xray2MRI model capable of generating pseudo-MRI volumes from a single X-ray image.
Experimental results demonstrate that our proposed approach is capable of generating pseudo-MRI sequences that approximate real MRI scans.
arXiv Detail & Related papers (2024-10-09T15:44:34Z) - Unifying Subsampling Pattern Variations for Compressed Sensing MRI with Neural Operators [72.79532467687427]
Compressed Sensing MRI reconstructs images of the body's internal anatomy from undersampled and compressed measurements.
Deep neural networks have shown great potential for reconstructing high-quality images from highly undersampled measurements.
We propose a unified model that is robust to different subsampling patterns and image resolutions in CS-MRI.
arXiv Detail & Related papers (2024-10-05T20:03:57Z) - Brain Tumor Classification on MRI in Light of Molecular Markers [61.77272414423481]
Co-deletion of the 1p/19q gene is associated with clinical outcomes in low-grade gliomas.
This study aims to utilize a specially MRI-based convolutional neural network for brain cancer detection.
arXiv Detail & Related papers (2024-09-29T07:04:26Z) - Evaluating the Impact of Sequence Combinations on Breast Tumor Segmentation in Multiparametric MRI [0.0]
The effect of sequence combinations in mpMRI remains under-investigated.
The nnU-Net model using DCE sequences achieved a Dice similarity coefficient (DSC) of 0.69 $pm$ 0.18 for functional tumor volume (FTV) segmentation.
arXiv Detail & Related papers (2024-06-12T02:09:05Z) - Exploration of Multi-Scale Image Fusion Systems in Intelligent Medical Image Analysis [3.881664394416534]
It is necessary to perform automatic segmentation of brain tumors on MRI images.
This project intends to build an MRI algorithm based on U-Net.
arXiv Detail & Related papers (2024-05-23T04:33:12Z) - X-Diffusion: Generating Detailed 3D MRI Volumes From a Single Image Using Cross-Sectional Diffusion Models [6.046082223332061]
X-Diffusion is a cross-sectional diffusion model tailored for Magnetic Resonance Imaging (MRI) data.
X-Diffusion is able to generate detailed 3D MRI volume from a single full-body DXA.
Remarkably, the resultant MRIs flawlessly retain essential features of the original MRI, including tumour profiles, spine curvature, brain volume, and beyond.
arXiv Detail & Related papers (2024-04-30T14:53:07Z) - Style transfer between Microscopy and Magnetic Resonance Imaging via
Generative Adversarial Network in small sample size settings [49.84018914962972]
Cross-modal augmentation of Magnetic Resonance Imaging (MRI) and microscopic imaging based on the same tissue samples is promising.
We tested a method for generating microscopic histological images from MRI scans of the corpus callosum using conditional generative adversarial network (cGAN) architecture.
arXiv Detail & Related papers (2023-10-16T13:58:53Z) - Exploring contrast generalisation in deep learning-based brain MRI-to-CT
synthesis [0.0]
MRI protocols may change over time or differ between centres resulting in low-quality sCT.
domain randomisation (DR) to increase the generalisation of a DL model for brain sCT generation.
arXiv Detail & Related papers (2023-03-17T18:45:05Z) - Moving from 2D to 3D: volumetric medical image classification for rectal
cancer staging [62.346649719614]
preoperative discrimination between T2 and T3 stages is arguably both the most challenging and clinically significant task for rectal cancer treatment.
We present a volumetric convolutional neural network to accurately discriminate T2 from T3 stage rectal cancer with rectal MR volumes.
arXiv Detail & Related papers (2022-09-13T07:10:14Z) - ShuffleUNet: Super resolution of diffusion-weighted MRIs using deep
learning [47.68307909984442]
Single Image Super-Resolution (SISR) is a technique aimed to obtain high-resolution (HR) details from one single low-resolution input image.
Deep learning extracts prior knowledge from big datasets and produces superior MRI images from the low-resolution counterparts.
arXiv Detail & Related papers (2021-02-25T14:52:23Z) - Segmentation of the Myocardium on Late-Gadolinium Enhanced MRI based on
2.5 D Residual Squeeze and Excitation Deep Learning Model [55.09533240649176]
The aim of this work is to develop an accurate automatic segmentation method based on deep learning models for the myocardial borders on LGE-MRI.
A total number of 320 exams (with a mean number of 6 slices per exam) were used for training and 28 exams used for testing.
The performance analysis of the proposed ensemble model in the basal and middle slices was similar as compared to intra-observer study and slightly lower at apical slices.
arXiv Detail & Related papers (2020-05-27T20:44:38Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.