Robust automated calcification meshing for biomechanical cardiac digital
twins
- URL: http://arxiv.org/abs/2403.04998v1
- Date: Fri, 8 Mar 2024 02:25:44 GMT
- Title: Robust automated calcification meshing for biomechanical cardiac digital
twins
- Authors: Daniel H. Pak, Minliang Liu, Theodore Kim, Caglar Ozturk, Raymond
McKay, Ellen T. Roche, Rudolph Gleason, James S. Duncan
- Abstract summary: We propose an end-to-end automated meshing algorithm that enables robust incorporation of patient-specific calcification onto a given heart mesh.
The algorithm provides a substantial speed-up from several hours of manual meshing to $sim$1 minute of automated computation.
- Score: 7.253614989403737
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Calcification has significant influence over cardiovascular diseases and
interventions. Detailed characterization of calcification is thus desired for
predictive modeling, but calcified heart meshes for physics-driven simulations
are still often reconstructed using manual operations. This poses a major
bottleneck for large-scale adoption of computational simulations for research
or clinical use. To address this, we propose an end-to-end automated meshing
algorithm that enables robust incorporation of patient-specific calcification
onto a given heart mesh. The algorithm provides a substantial speed-up from
several hours of manual meshing to $\sim$1 minute of automated computation, and
it solves an important problem that cannot be addressed with recent template
registration-based heart meshing techniques. We validated our final calcified
heart meshes with extensive simulations, demonstrating our ability to
accurately model patient-specific aortic stenosis and Transcatheter Aortic
Valve Replacement. Our method may serve as an important tool for accelerating
the development and usage of physics-driven simulations for cardiac digital
twins.
Related papers
- AI-powered multimodal modeling of personalized hemodynamics in aortic stenosis [3.9933028169938605]
Aortic stenosis is the most common valvular heart disease in developed countries.
High-fidelity preclinical models can improve AS management by enabling therapeutic innovation, early diagnosis, and tailored treatment planning.
Here, we propose an AI-powered computational framework for accelerated and democratized patient-specific modeling of AS hemodynamics from computed tomography.
arXiv Detail & Related papers (2024-06-29T21:49:45Z) - Digital twinning of cardiac electrophysiology models from the surface
ECG: a geodesic backpropagation approach [39.36827689390718]
We introduce a novel method, Geodesic-BP, to solve the inverse eikonal problem.
We show that Geodesic-BP can reconstruct a simulated cardiac activation with high accuracy in a synthetic test case.
Given the future shift towards personalized medicine, Geodesic-BP has the potential to help in future functionalizations of cardiac models.
arXiv Detail & Related papers (2023-08-16T14:57:12Z) - Real-time whole-heart electromechanical simulations using Latent Neural
Ordinary Differential Equations [2.208529796170897]
We use Latent Neural Ordinary Differential Equations to learn the temporal pressure-volume dynamics of a heart failure patient.
Our surrogate model based on LNODEs is trained from 400 3D-0D whole-heart closed-loop electromechanical simulations.
This paper introduces the most advanced surrogate model of cardiac function available in the literature.
arXiv Detail & Related papers (2023-06-08T16:13:29Z) - Deep Computational Model for the Inference of Ventricular Activation
Properties [10.886815576856574]
Patient-specific cardiac computational models are essential for the efficient realization of precision medicine and in-silico clinical trials using digital twins.
We propose a deep learning based patient-specific computational model, which can fuse both anatomical and electrophysiological information for the inference of ventricular activation properties.
We employ the Eikonal model to generate simulated electrocardiogram with ground truth properties to train the inference model, where specific patient information has also been considered.
arXiv Detail & Related papers (2022-08-08T10:23:43Z) - Physics-informed machine learning with differentiable programming for
heterogeneous underground reservoir pressure management [64.17887333976593]
Avoiding over-pressurization in subsurface reservoirs is critical for applications like CO2 sequestration and wastewater injection.
Managing the pressures by controlling injection/extraction are challenging because of complex heterogeneity in the subsurface.
We use differentiable programming with a full-physics model and machine learning to determine the fluid extraction rates that prevent over-pressurization.
arXiv Detail & Related papers (2022-06-21T20:38:13Z) - Machine Learning-based Efficient Ventricular Tachycardia Detection Model
of ECG Signal [0.0]
In primary diagnosis and analysis of heart defects, an ECG signal plays a significant role.
This paper presents a model for the prediction of ventricular tachycardia arrhythmia using noise filtering, a unique set of ECG features, and a machine learning-based classifier model.
arXiv Detail & Related papers (2021-12-24T05:56:09Z) - Deep Metric Learning with Locality Sensitive Angular Loss for
Self-Correcting Source Separation of Neural Spiking Signals [77.34726150561087]
We propose a methodology based on deep metric learning to address the need for automated post-hoc cleaning and robust separation filters.
We validate this method with an artificially corrupted label set based on source-separated high-density surface electromyography recordings.
This approach enables a neural network to learn to accurately decode neurophysiological time series using any imperfect method of labelling the signal.
arXiv Detail & Related papers (2021-10-13T21:51:56Z) - Data-driven generation of plausible tissue geometries for realistic
photoacoustic image synthesis [53.65837038435433]
Photoacoustic tomography (PAT) has the potential to recover morphological and functional tissue properties.
We propose a novel approach to PAT data simulation, which we refer to as "learning to simulate"
We leverage the concept of Generative Adversarial Networks (GANs) trained on semantically annotated medical imaging data to generate plausible tissue geometries.
arXiv Detail & Related papers (2021-03-29T11:30:18Z) - Motion Pyramid Networks for Accurate and Efficient Cardiac Motion
Estimation [51.72616167073565]
We propose Motion Pyramid Networks, a novel deep learning-based approach for accurate and efficient cardiac motion estimation.
We predict and fuse a pyramid of motion fields from multiple scales of feature representations to generate a more refined motion field.
We then use a novel cyclic teacher-student training strategy to make the inference end-to-end and further improve the tracking performance.
arXiv Detail & Related papers (2020-06-28T21:03:19Z) - Self-Training with Improved Regularization for Sample-Efficient Chest
X-Ray Classification [80.00316465793702]
We present a deep learning framework that enables robust modeling in challenging scenarios.
Our results show that using 85% lesser labeled data, we can build predictive models that match the performance of classifiers trained in a large-scale data setting.
arXiv Detail & Related papers (2020-05-03T02:36:00Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.