Prediction of Rapid Early Progression and Survival Risk with
Pre-Radiation MRI in WHO Grade 4 Glioma Patients
- URL: http://arxiv.org/abs/2306.16531v1
- Date: Wed, 28 Jun 2023 20:03:18 GMT
- Title: Prediction of Rapid Early Progression and Survival Risk with
Pre-Radiation MRI in WHO Grade 4 Glioma Patients
- Authors: Walia Farzana, Mustafa M Basree, Norou Diawara, Zeina A. Shboul, Sagel
Dubey, Marie M Lockhart, Mohamed Hamza, Joshua D. Palmer, Khan M.
Iftekharuddin
- Abstract summary: We investigate the potential of ra-diomics, sophisticated multi-resolution fractal texture features, and different molecular features as a diagnostic and prognostic tool for prediction of REP from non-REP cases.
The prediction of survival for the patients cohort produces precision of 0.881 with standard deviation of 0.056.
The experimental result further shows that mul-ti-resolution fractal texture features perform better than conventional radiomics features for REP and survival outcomes.
- Score: 0.5365740459403827
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Recent clinical research describes a subset of glioblastoma patients that
exhibit REP prior to start of radiation therapy. Current literature has thus
far described this population using clinicopathologic features. To our
knowledge, this study is the first to investigate the potential of conventional
ra-diomics, sophisticated multi-resolution fractal texture features, and
different molecular features (MGMT, IDH mutations) as a diagnostic and
prognostic tool for prediction of REP from non-REP cases using computational
and statistical modeling methods. Radiation-planning T1 post-contrast (T1C) MRI
sequences of 70 patients are analyzed. Ensemble method with 5-fold cross
validation over 1000 iterations offers AUC of 0.793 with standard deviation of
0.082 for REP and non-REP classification. In addition, copula-based modeling
under dependent censoring (where a subset of the patients may not be followed
up until death) identifies significant features (p-value <0.05) for survival
probability and prognostic grouping of patient cases. The prediction of
survival for the patients cohort produces precision of 0.881 with standard
deviation of 0.056. The prognostic index (PI) calculated using the fused
features suggests that 84.62% of REP cases fall under the bad prognostic group,
suggesting potentiality of fused features to predict a higher percentage of REP
cases. The experimental result further shows that mul-ti-resolution fractal
texture features perform better than conventional radiomics features for REP
and survival outcomes.
Related papers
- Machine Learning for ALSFRS-R Score Prediction: Making Sense of the Sensor Data [44.99833362998488]
Amyotrophic Lateral Sclerosis (ALS) is a rapidly progressive neurodegenerative disease that presents individuals with limited treatment options.
The present investigation, spearheaded by the iDPP@CLEF 2024 challenge, focuses on utilizing sensor-derived data obtained through an app.
arXiv Detail & Related papers (2024-07-10T19:17:23Z) - Predicting the risk of early-stage breast cancer recurrence using H\&E-stained tissue images [5.507561997194002]
We investigated whether deep learning algorithms can predict patients' risk of recurrence by analyzing the pathology images of their cancer histology.
We obtained sensitivity of 0.857, 0.746, and 0.529 for predicting low, intermediate, and high risk, and specificity of 0.816, 0.803, and 0.972.
When we checked the model learned through these studies through the class activation map, we found that it actually considered tubule formation and mitotic rate when predicting different risk groups.
arXiv Detail & Related papers (2024-06-10T08:51:59Z) - Recurrence-Free Survival Prediction for Anal Squamous Cell Carcinoma
Chemoradiotherapy using Planning CT-based Radiomics Model [5.485361086613949]
Approximately 30% of non-metastatic anal squamous cell carcinoma (A SCC) patients will experience recurrence after chemotherapy (CRT)
We developed a model leveraging information extracted from radiation pretreatment planning CT to predict recurrence-free survival (RFS) in A SCC patients after CRT.
arXiv Detail & Related papers (2023-09-05T20:22:26Z) - Brain Tumor Recurrence vs. Radiation Necrosis Classification and Patient
Survivability Prediction [0.0]
GBM is the most aggressive brain tumor in adults that has a short survival rate even after aggressive treatment with surgery and radiation therapy.
The changes on magnetic resonance imaging (MRI) for patients with GBM after radiotherapy are indicative of radiation-induced necrosis (RN) or recurrent brain tumor (rBT)
This study proposes computational modeling with statistically rigorous repeated random sub-sampling to balance the subset sample size for rBT and RN classification.
arXiv Detail & Related papers (2023-06-05T21:39:11Z) - L1-regularized neural ranking for risk stratification and its
application to prediction of time to distant metastasis in luminal node
negative chemotherapy na\"ive breast cancer patients [9.269883992088147]
We propose a ranking based censoring-aware machine learning model for answering such questions.
We analyze the association of time to distant metastasis with various clinical parameters for early stage, luminal (ER+ or HER2-) breast cancer patients.
Our analysis shows that the proposed risk stratification formula can discriminate between cases with high and low risk of distant metastasis.
arXiv Detail & Related papers (2021-08-23T19:04:18Z) - Controlling False Positive/Negative Rates for Deep-Learning-Based
Prostate Cancer Detection on Multiparametric MR images [58.85481248101611]
We propose a novel PCa detection network that incorporates a lesion-level cost-sensitive loss and an additional slice-level loss based on a lesion-to-slice mapping function.
Our experiments based on 290 clinical patients concludes that 1) The lesion-level FNR was effectively reduced from 0.19 to 0.10 and the lesion-level FPR was reduced from 1.03 to 0.66 by changing the lesion-level cost.
arXiv Detail & Related papers (2021-06-04T09:51:27Z) - Comparison of Machine Learning Classifiers to Predict Patient Survival
and Genetics of GBM: Towards a Standardized Model for Clinical Implementation [44.02622933605018]
Radiomic models have been shown to outperform clinical data for outcome prediction in glioblastoma (GBM)
We aimed to compare nine machine learning classifiers to predict overall survival (OS), isocitrate dehydrogenase (IDH) mutation, O-6-methylguanine-DNA-methyltransferase (MGMT) promoter methylation, epidermal growth factor receptor (EGFR) VII amplification and Ki-67 expression in GBM patients.
xGB obtained maximum accuracy for OS (74.5%), AB for IDH mutation (88%), MGMT methylation (71,7%), Ki-67 expression (86,6%), and EGFR amplification (81,
arXiv Detail & Related papers (2021-02-10T15:10:37Z) - MIA-Prognosis: A Deep Learning Framework to Predict Therapy Response [58.0291320452122]
This paper aims at a unified deep learning approach to predict patient prognosis and therapy response.
We formalize the prognosis modeling as a multi-modal asynchronous time series classification task.
Our predictive model could further stratify low-risk and high-risk patients in terms of long-term survival.
arXiv Detail & Related papers (2020-10-08T15:30:17Z) - Integrative Analysis for COVID-19 Patient Outcome Prediction [53.11258640541513]
We combine radiomics of lung opacities and non-imaging features from demographic data, vital signs, and laboratory findings to predict need for intensive care unit admission.
Our methods may also be applied to other lung diseases including but not limited to community acquired pneumonia.
arXiv Detail & Related papers (2020-07-20T19:08:50Z) - Joint Prediction and Time Estimation of COVID-19 Developing Severe
Symptoms using Chest CT Scan [49.209225484926634]
We propose a joint classification and regression method to determine whether the patient would develop severe symptoms in the later time.
To do this, the proposed method takes into account 1) the weight for each sample to reduce the outliers' influence and explore the problem of imbalance classification.
Our proposed method yields 76.97% of accuracy for predicting the severe cases, 0.524 of the correlation coefficient, and 0.55 days difference for the converted time.
arXiv Detail & Related papers (2020-05-07T12:16:37Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.