Vestibular schwannoma growth prediction from longitudinal MRI by time conditioned neural fields

• URL: http://arxiv.org/abs/2404.02614v2
• Date: Thu, 4 Apr 2024 08:57:00 GMT
• Title: Vestibular schwannoma growth prediction from longitudinal MRI by time conditioned neural fields
• Authors: Yunjie Chen, Jelmer M. Wolterink, Olaf M. Neve, Stephan R. Romeijn, Berit M. Verbist, Erik F. Hensen, Qian Tao, Marius Staring,
• Abstract summary: We introduce DeepGrowth, a deep learning method that incorporates neural fields and recurrent neural networks for prospective tumor growth prediction. The experiments on an in-house longitudinal VS dataset showed that the proposed model significantly improved the performance.
• Score: 5.662694302758444
• License: http://creativecommons.org/licenses/by/4.0/
• Abstract: Vestibular schwannomas (VS) are benign tumors that are generally managed by active surveillance with MRI examination. To further assist clinical decision-making and avoid overtreatment, an accurate prediction of tumor growth based on longitudinal imaging is highly desirable. In this paper, we introduce DeepGrowth, a deep learning method that incorporates neural fields and recurrent neural networks for prospective tumor growth prediction. In the proposed method, each tumor is represented as a signed distance function (SDF) conditioned on a low-dimensional latent code. Unlike previous studies that perform tumor shape prediction directly in the image space, we predict the latent codes instead and then reconstruct future shapes from it. To deal with irregular time intervals, we introduce a time-conditioned recurrent module based on a ConvLSTM and a novel temporal encoding strategy, which enables the proposed model to output varying tumor shapes over time. The experiments on an in-house longitudinal VS dataset showed that the proposed model significantly improved the performance ($\ge 1.6\%$ Dice score and $\ge0.20$ mm 95\% Hausdorff distance), in particular for top 20\% tumors that grow or shrink the most ($\ge 4.6\%$ Dice score and $\ge 0.73$ mm 95\% Hausdorff distance). Our code is available at ~\burl{https://github.com/cyjdswx/DeepGrowth}

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